IL_7K50_141

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UC*GAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K50_141 not in the Motif Atlas

Homologous match to IL_5J7L_032

Geometric discrepancy: 0.2442

The information below is about IL_5J7L_032

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_67809.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

21

Unit IDs

7K50|1|3|U|659
7K50|1|3|C|660
*
7K50|1|3|G|745
7K50|1|3|A|746
7K50|1|3|A|747

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S15