IL_7K52_033

3D structure

PDB id

7K52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7K52|1|1|A|1156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K52_033 not in the Motif Atlas

Homologous match to IL_4WF9_036

Geometric discrepancy: 0.1039

The information below is about IL_4WF9_036

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7K52|1|1|C|998
7K52|1|1|U|999
7K52|1|1|A|1000
7K52|1|1|A|1001
7K52|1|1|G|1002
*
7K52|1|1|C|1153
7K52|1|1|G|1154
7K52|1|1|A|1155
7K52|1|1|A|1156
7K52|1|1|G|1157

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21

Chain z

50S ribosomal protein L30