IL_7KWG_021
3D structure
- PDB id
- 7KWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KWG_021 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.148
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
7KWG|1|a|C|577
7KWG|1|a|G|578
7KWG|1|a|U|579
7KWG|1|a|A|580
7KWG|1|a|A|581
7KWG|1|a|A|582
7KWG|1|a|G|583
*
7KWG|1|a|C|890
7KWG|1|a|G|891
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: