IL_7KWG_069
3D structure
- PDB id
- 7KWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- AAGAGG*CUGGU
- Length
- 11 nucleotides
- Bulged bases
- 7KWG|1|a|A|673
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KWG_069 not in the Motif Atlas
- Geometric match to IL_9JA9_001
- Geometric discrepancy: 0.3681
- The information below is about IL_9JA9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7KWG|1|a|A|670
7KWG|1|a|A|671
7KWG|1|a|G|672
7KWG|1|a|A|673
7KWG|1|a|G|674
7KWG|1|a|G|675
*
7KWG|1|a|C|747
7KWG|1|a|U|748
7KWG|1|a|G|749
7KWG|1|a|G|750
7KWG|1|a|U|751
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
Coloring options: