IL_7LH5_020
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7LH5|1|AA|A|532, 7LH5|1|AA|U|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LH5_020 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.169
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7LH5|1|AA|G|515
7LH5|1|AA|U|516
7LH5|1|AA|G|517
7LH5|1|AA|C|518
7LH5|1|AA|C|519
7LH5|1|AA|A|520
7LH5|1|AA|G|521
*
7LH5|1|AA|C|528
7LH5|1|AA|G|529
7LH5|1|AA|G|530
7LH5|1|AA|U|531
7LH5|1|AA|A|532
7LH5|1|AA|A|533
7LH5|1|AA|U|534
7LH5|1|AA|A|535
7LH5|1|AA|C|536
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AC
- 30S ribosomal protein S3
- Chain AD
- 30S ribosomal protein S4
- Chain AL
- 30S ribosomal protein S12
- Chain AX
- mRNA
- Chain AY
- Transfer RNA; tRNA
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