IL_7LS1_085
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 7LS1|1|A2|U|1732, 7LS1|1|A2|C|1733, 7LS1|1|A2|G|1857, 7LS1|1|A2|A|1859
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_085 not in the Motif Atlas
- Geometric match to IL_5TBW_051
- Geometric discrepancy: 0.3007
- The information below is about IL_5TBW_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7LS1|1|A2|C|1728
7LS1|1|A2|U|1729
7LS1|1|A2|C|1730
7LS1|1|A2|A|1731
7LS1|1|A2|U|1732
7LS1|1|A2|C|1733
7LS1|1|A2|A|1734
7LS1|1|A2|G|1735
*
7LS1|1|A2|C|1855
7LS1|1|A2|U|1856
7LS1|1|A2|G|1857
7LS1|1|A2|G|1858
7LS1|1|A2|A|1859
7LS1|1|A2|G|1860
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain C1
- 60S ribosomal protein L9
- Chain G1
- 60S ribosomal protein L14
- Chain I2
- 60S ribosomal protein L13a
- Chain M2
- 60S ribosomal protein L18a
- Chain g2
- Ubiquitin-60S ribosomal protein L40
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