IL_7LS1_211
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GG*CUC
- Length
- 5 nucleotides
- Bulged bases
- 7LS1|1|m2|U|296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_211 not in the Motif Atlas
- Geometric match to IL_3MEI_001
- Geometric discrepancy: 0.3201
- The information below is about IL_3MEI_001
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 173
Unit IDs
7LS1|1|m2|G|290
7LS1|1|m2|G|291
*
7LS1|1|m2|C|295
7LS1|1|m2|U|296
7LS1|1|m2|C|297
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain K3
- 40S ribosomal protein S6
- Chain r2
- 40S ribosomal protein S4, X isoform
- Chain u
- 40S ribosomal protein S8
- Chain w2
- 40S ribosomal protein S11
Coloring options: