IL_7LS2_008
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CC*GUG
- Length
- 5 nucleotides
- Bulged bases
- 7LS2|1|A2|U|143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_008 not in the Motif Atlas
- Geometric match to IL_7KVT_002
- Geometric discrepancy: 0.347
- The information below is about IL_7KVT_002
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 173
Unit IDs
7LS2|1|A2|C|125
7LS2|1|A2|C|126
*
7LS2|1|A2|G|142
7LS2|1|A2|U|143
7LS2|1|A2|G|144
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain B1
- 60S ribosomal protein L7a
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain H1
- 60S ribosomal protein L15
- Chain R2
- 60S ribosomal protein L23a
- Chain b2
- 60S ribosomal protein L35
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