IL_7LS2_067
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUCGCUACG*CG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_067 not in the Motif Atlas
- Homologous match to IL_5TBW_036
- Geometric discrepancy: 0.5359
- The information below is about IL_5TBW_036
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_42230.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7LS2|1|A2|C|1507
7LS2|1|A2|U|1508
7LS2|1|A2|C|1509
7LS2|1|A2|G|1510
7LS2|1|A2|C|1511
7LS2|1|A2|U|1512
7LS2|1|A2|A|1521
7LS2|1|A2|C|1522
7LS2|1|A2|G|1523
*
7LS2|1|A2|C|1643
7LS2|1|A2|G|1644
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain A1
- 60S ribosomal protein L7
- Chain F2
- 60S ribosomal protein L4
- Chain K2
- 60S ribosomal protein L18
- Chain V2
- 60S ribosomal protein L29
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