IL_7LS2_069
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUUA*UUCUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_069 not in the Motif Atlas
- Homologous match to IL_8C3A_044
- Geometric discrepancy: 0.137
- The information below is about IL_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
7LS2|1|A2|G|1547
7LS2|1|A2|A|1548
7LS2|1|A2|U|1549
7LS2|1|A2|U|1550
7LS2|1|A2|A|1551
*
7LS2|1|A2|U|1583
7LS2|1|A2|U|1584
7LS2|1|A2|C|1585
7LS2|1|A2|U|1586
7LS2|1|A2|C|1587
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain D1
- 60S ribosomal protein L10-like
- Chain G2
- 60S ribosomal protein L5
- Chain N2
- 60S ribosomal protein L21
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