IL_7LS2_095
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 7LS2|1|A2|A|2267, 7LS2|1|A2|A|2268
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_095 not in the Motif Atlas
- Homologous match to IL_8C3A_067
- Geometric discrepancy: 0.1283
- The information below is about IL_8C3A_067
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7LS2|1|A2|C|2201
7LS2|1|A2|U|2202
7LS2|1|A2|G|2203
7LS2|1|A2|A|2204
7LS2|1|A2|G|2205
*
7LS2|1|A2|C|2264
7LS2|1|A2|G|2265
7LS2|1|A2|A|2266
7LS2|1|A2|A|2267
7LS2|1|A2|A|2268
7LS2|1|A2|G|2269
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D2
- 60S ribosomal protein L8
- Chain a2
- 60S ribosomal protein L34
- Chain d2
- 60S ribosomal protein L37
- Chain f2
- 60S ribosomal protein L39
Coloring options: