IL_7LS2_144
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GACCU*AGC
- Length
- 8 nucleotides
- Bulged bases
- 7LS2|1|A2|C|4001
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_144 not in the Motif Atlas
- Geometric match to IL_8C3A_419
- Geometric discrepancy: 0.3113
- The information below is about IL_8C3A_419
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47767.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
7LS2|1|A2|G|3999
7LS2|1|A2|A|4000
7LS2|1|A2|C|4001
7LS2|1|A2|C|4002
7LS2|1|A2|U|4003
*
7LS2|1|A2|A|4015
7LS2|1|A2|G|4016
7LS2|1|A2|C|4017
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F1
- 60S ribosomal protein L13
- Chain K2
- 60S ribosomal protein L18
- Chain U2
- 60S ribosomal protein L27a
- Chain i2
- 60S ribosomal protein L36a
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