IL_7LS2_172

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCCC*GCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LS2_172 not in the Motif Atlas

Geometric match to IL_4WF9_017

Geometric discrepancy: 0.2509

The information below is about IL_4WF9_017

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01334.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

23

Unit IDs

7LS2|1|A2|C|4435
7LS2|1|A2|C|4436
7LS2|1|A2|C|4437
7LS2|1|A2|C|4438
*
7LS2|1|A2|G|4494
7LS2|1|A2|C|4495
7LS2|1|A2|G|4496

Current chains

Chain A2

28S rRNA

Nearby chains