IL_7LS2_191
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 7LS2|1|C2|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_191 not in the Motif Atlas
- Homologous match to IL_5TBW_145
- Geometric discrepancy: 0.2486
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7LS2|1|C2|U|64
7LS2|1|C2|A|65
7LS2|1|C2|A|66
*
7LS2|1|C2|U|92
7LS2|1|C2|C|93
7LS2|1|C2|G|94
7LS2|1|C2|A|95
Current chains
- Chain C2
- 5.8S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- 60S ribosomal protein L26
- Chain b2
- 60S ribosomal protein L35
- Chain d2
- 60S ribosomal protein L37
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