IL_7LS2_247
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAGUAUG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_247 not in the Motif Atlas
- Homologous match to IL_4V88_440
- Geometric discrepancy: 0.1267
- The information below is about IL_4V88_440
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7LS2|1|m2|G|1170
7LS2|1|m2|G|1171
7LS2|1|m2|A|1172
7LS2|1|m2|G|1173
7LS2|1|m2|U|1174
7LS2|1|m2|A|1175
7LS2|1|m2|U|1176
7LS2|1|m2|G|1177
*
7LS2|1|m2|U|1188
7LS2|1|m2|G|1189
7LS2|1|m2|A|1190
7LS2|1|m2|A|1191
7LS2|1|m2|A|1192
7LS2|1|m2|C|1193
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain E3
- 40S ribosomal protein S23
- Chain h2
- 60S ribosomal protein L41
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