IL_7LS2_316

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAGCC*GGAACC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LS2_316 not in the Motif Atlas

Geometric match to IL_5TBW_476

Geometric discrepancy: 0.3888

The information below is about IL_5TBW_476

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31007.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

5

Unit IDs

7LS2|1|A2|G|4394
7LS2|1|A2|G|4395
7LS2|1|A2|A|4396
7LS2|1|A2|G|4397
7LS2|1|A2|C|4398
7LS2|1|A2|C|4399
*
7LS2|1|A2|G|4599
7LS2|1|A2|G|4600
7LS2|1|A2|A|4601
7LS2|1|A2|A|4602
7LS2|1|A2|C|4603
7LS2|1|A2|C|4604

Current chains

Chain A2

28S rRNA

Nearby chains

Chain Z2

60S ribosomal protein L35a