IL_7LV0_151

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

7LV0|1|3|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_151 not in the Motif Atlas

Homologous match to IL_5J7L_035

Geometric discrepancy: 0.1315

The information below is about IL_5J7L_035

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

7LV0|1|3|U|684
7LV0|1|3|G|685
7LV0|1|3|U|686
7LV0|1|3|A|687
7LV0|1|3|G|688
*
7LV0|1|3|C|699
7LV0|1|3|G|700
7LV0|1|3|U|701
7LV0|1|3|A|702
7LV0|1|3|G|703
7LV0|1|3|A|704
7LV0|1|3|G|705
7LV0|1|3|A|706

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain P

30S ribosomal protein S11