IL_7M4W_139
3D structure
- PDB id
- 7M4W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S Empty
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- UGAAAUCC*GAAUUG
- Length
- 14 nucleotides
- Bulged bases
- 7M4W|1|a|U|629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4W_139 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.0966
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7M4W|1|a|U|602
7M4W|1|a|G|603
7M4W|1|a|A|604
7M4W|1|a|A|605
7M4W|1|a|A|606
7M4W|1|a|U|607
7M4W|1|a|C|608
7M4W|1|a|C|609
*
7M4W|1|a|G|625
7M4W|1|a|A|626
7M4W|1|a|A|627
7M4W|1|a|U|628
7M4W|1|a|U|629
7M4W|1|a|G|630
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain h
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S16
Coloring options: