IL_7M4Z_009

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7M4Z|1|A|U|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_009 not in the Motif Atlas

Geometric match to IL_5J7L_299

Geometric discrepancy: 0.2654

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7M4Z|1|A|U|279
7M4Z|1|A|A|280
7M4Z|1|A|A|281
7M4Z|1|A|G|282
*
7M4Z|1|A|U|362
7M4Z|1|A|G|363
7M4Z|1|A|A|364
7M4Z|1|A|U|365
7M4Z|1|A|G|366

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28