IL_7M4Z_045

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

7M4Z|1|A|G|1327

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_045 not in the Motif Atlas

Homologous match to IL_5J7L_291

Geometric discrepancy: 0.1704

The information below is about IL_5J7L_291

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

7M4Z|1|A|C|1314
7M4Z|1|A|C|1315
7M4Z|1|A|A|1316
7M4Z|1|A|A|1317
7M4Z|1|A|C|1318
*
7M4Z|1|A|G|1326
7M4Z|1|A|G|1327
7M4Z|1|A|G|1328

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L22