IL_7M4Z_051

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CUAA*UGAUG

Length

9 nucleotides

Bulged bases

7M4Z|1|A|U|1552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_051 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.0817

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7M4Z|1|A|C|1432
7M4Z|1|A|U|1433
7M4Z|1|A|A|1434
7M4Z|1|A|A|1435
*
7M4Z|1|A|U|1549
7M4Z|1|A|G|1550
7M4Z|1|A|A|1551
7M4Z|1|A|U|1552
7M4Z|1|A|G|1553

Current chains

Chain A

23s ribosomal RNA

Nearby chains