IL_7MDZ_206
3D structure
- PDB id
- 7MDZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S rabbit ribosome stalled with benzamide-CHX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MDZ_206 not in the Motif Atlas
- Homologous match to IL_4V88_416
- Geometric discrepancy: 0.1759
- The information below is about IL_4V88_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.3
- Basepair signature
- cWW-L-cWW-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
7MDZ|1|9|G|665
7MDZ|1|9|U|666
7MDZ|1|9|U|667
7MDZ|1|9|A|668
7MDZ|1|9|A|669
7MDZ|1|9|A|670
7MDZ|1|9|A|671
*
7MDZ|1|9|U|1161
7MDZ|1|9|C|1162
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain XX
- uS12
- Chain aa
- 40S ribosomal protein S26
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