IL_7MPI_257
3D structure
- PDB id
- 7MPI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GAG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPI_257 not in the Motif Atlas
- Geometric match to IL_4KQ0_004
- Geometric discrepancy: 0.1621
- The information below is about IL_4KQ0_004
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
7MPI|1|B5|G|1546
7MPI|1|B5|A|1547
7MPI|1|B5|G|1548
*
7MPI|1|B5|C|1563
7MPI|1|B5|U|1564
7MPI|1|B5|C|1565
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BP
- 40S ribosomal protein S15
- Chain BS
- 40S ribosomal protein S18-A
- Chain BT
- 40S ribosomal protein S19-A
Coloring options: