IL_7MPJ_066
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 7MPJ|1|A1|U|1629, 7MPJ|1|A1|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_066 not in the Motif Atlas
- Homologous match to IL_8C3A_072
- Geometric discrepancy: 0.4476
- The information below is about IL_8C3A_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7MPJ|1|A1|U|1627
7MPJ|1|A1|C|1628
7MPJ|1|A1|U|1629
7MPJ|1|A1|U|1630
7MPJ|1|A1|C|1631
*
7MPJ|1|A1|G|1811
7MPJ|1|A1|G|1812
7MPJ|1|A1|A|1813
7MPJ|1|A1|A|1814
7MPJ|1|A1|U|1815
7MPJ|1|A1|A|1816
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AZ
- 60S ribosomal protein L27-A
Coloring options: