IL_7MPJ_136
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUA*UUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 7MPJ|1|A1|G|3377
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_136 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.0832
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7MPJ|1|A1|G|3328
7MPJ|1|A1|U|3329
7MPJ|1|A1|A|3330
*
7MPJ|1|A1|U|3373
7MPJ|1|A1|U|3374
7MPJ|1|A1|A|3375
7MPJ|1|A1|A|3376
7MPJ|1|A1|G|3377
7MPJ|1|A1|C|3378
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain AW
- 60S ribosomal protein L24-A
- Chain Ad
- 60S ribosomal protein L31-A
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