IL_7MSH_223
3D structure
- PDB id
- 7MSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UGG*UCAUCA
- Length
- 9 nucleotides
- Bulged bases
- 7MSH|1|a|A|1193
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MSH_223 not in the Motif Atlas
- Geometric match to IL_4V88_451
- Geometric discrepancy: 0.2646
- The information below is about IL_4V88_451
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_97255.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7MSH|1|a|U|1047
7MSH|1|a|G|1048
7MSH|1|a|G|1049
*
7MSH|1|a|U|1191
7MSH|1|a|C|1192
7MSH|1|a|A|1193
7MSH|1|a|U|1194
7MSH|1|a|C|1195
7MSH|1|a|A|1196
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: