IL_7MSH_242
3D structure
- PDB id
- 7MSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UGUAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 7MSH|1|a|A|693
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MSH_242 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.2962
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7MSH|1|a|U|675
7MSH|1|a|G|676
7MSH|1|a|U|677
7MSH|1|a|A|678
7MSH|1|a|G|679
*
7MSH|1|a|C|690
7MSH|1|a|G|691
7MSH|1|a|C|692
7MSH|1|a|A|693
7MSH|1|a|G|694
7MSH|1|a|A|695
7MSH|1|a|U|696
7MSH|1|a|A|697
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
- Chain x
- Energy-dependent translational throttle protein EttA
Coloring options: