3D structure

PDB id
7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.79 Å

Loop

Sequence
GA*UCC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MSM_033 not in the Motif Atlas
Geometric match to IL_7RQB_028
Geometric discrepancy: 0.1013
The information below is about IL_7RQB_028
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_42622.4
Basepair signature
cWW-cSH-cWW
Number of instances in this motif group
33

Unit IDs

7MSM|1|A|G|991
7MSM|1|A|A|992
*
7MSM|1|A|U|1042
7MSM|1|A|C|1043
7MSM|1|A|C|1044

Current chains

Chain A
23S rRNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain M
50S ribosomal protein L16
Chain W
50S ribosomal protein L27

Coloring options:


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