IL_7MSM_034
3D structure
- PDB id
- 7MSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.79 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 7MSM|1|A|U|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MSM_034 not in the Motif Atlas
- Homologous match to IL_4WF9_033
- Geometric discrepancy: 0.1236
- The information below is about IL_4WF9_033
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7MSM|1|A|G|993
7MSM|1|A|C|994
7MSM|1|A|U|995
7MSM|1|A|A|996
7MSM|1|A|C|997
7MSM|1|A|U|998
*
7MSM|1|A|A|1038
7MSM|1|A|A|1039
7MSM|1|A|A|1040
7MSM|1|A|C|1041
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: