3D structure

PDB id
7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.79 Å

Loop

Sequence
GCUACU*AAAC
Length
10 nucleotides
Bulged bases
7MSM|1|A|U|995
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MSM_034 not in the Motif Atlas
Homologous match to IL_4WF9_033
Geometric discrepancy: 0.1236
The information below is about IL_4WF9_033
Detailed Annotation
C-loop with bulged stacked A's
Broad Annotation
C-loop
Motif group
IL_26222.2
Basepair signature
cWW-cWS-cSH-tWH-R-L-R-cWW
Number of instances in this motif group
6

Unit IDs

7MSM|1|A|G|993
7MSM|1|A|C|994
7MSM|1|A|U|995
7MSM|1|A|A|996
7MSM|1|A|C|997
7MSM|1|A|U|998
*
7MSM|1|A|A|1038
7MSM|1|A|A|1039
7MSM|1|A|A|1040
7MSM|1|A|C|1041

Current chains

Chain A
23S rRNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain M
50S ribosomal protein L16

Coloring options:


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