IL_7MSM_048

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CAGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7MSM|1|A|C|1342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_048 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.16

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

7MSM|1|A|C|1339
7MSM|1|A|A|1340
7MSM|1|A|G|1341
7MSM|1|A|C|1342
7MSM|1|A|G|1343
7MSM|1|A|A|1344
7MSM|1|A|A|1345
7MSM|1|A|G|1346
*
7MSM|1|A|U|1365
7MSM|1|A|G|1366
7MSM|1|A|G|1367
7MSM|1|A|A|1368
7MSM|1|A|G|1369

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20