IL_7MSM_073

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

AAUAUC*GGAU

Length

10 nucleotides

Bulged bases

7MSM|1|A|U|1949, 7MSM|1|A|A|1950

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_073 not in the Motif Atlas

Geometric match to IL_6DLR_005

Geometric discrepancy: 0.2665

The information below is about IL_6DLR_005

Detailed Annotation

tWW and near cWH

Broad Annotation

tWW and near cWH

Motif group

IL_45860.1

Basepair signature

cWW-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

7MSM|1|A|A|1947
7MSM|1|A|A|1948
7MSM|1|A|U|1949
7MSM|1|A|A|1950
7MSM|1|A|U|1951
7MSM|1|A|C|1952
*
7MSM|1|A|G|1977
7MSM|1|A|G|1978
7MSM|1|A|A|1979
7MSM|1|A|U|1980

Current chains

Chain A

23S rRNA

Nearby chains