3D structure

PDB id
7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.79 Å

Loop

Sequence
UUAAG*UUAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MSM_079 not in the Motif Atlas
Homologous match to IL_7RQB_074
Geometric discrepancy: 0.1936
The information below is about IL_7RQB_074
Detailed Annotation
UAA/GAN with extra pair
Broad Annotation
No text annotation
Motif group
IL_90318.1
Basepair signature
cWW-tSH-L-R-L-R-cWW
Number of instances in this motif group
3

Unit IDs

7MSM|1|A|U|2085
7MSM|1|A|U|2086
7MSM|1|A|A|2087
7MSM|1|A|A|2088
7MSM|1|A|G|2089
*
7MSM|1|A|U|2125
7MSM|1|A|U|2126
7MSM|1|A|A|2127
7MSM|1|A|A|2128
7MSM|1|A|G|2129

Current chains

Chain A
23S rRNA

Nearby chains

Chain x
Energy-dependent translational throttle protein EttA

Coloring options:


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