IL_7MSM_080

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

AGGACC*GAGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_080 not in the Motif Atlas

Geometric match to IL_5LR4_002

Geometric discrepancy: 0.308

The information below is about IL_5LR4_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06136.2

Basepair signature

cWW-tHS-cWW-tHS-tSH-tSH-cWW

Number of instances in this motif group

6

Unit IDs

7MSM|1|A|A|2090
7MSM|1|A|G|2091
7MSM|1|A|G|2092
7MSM|1|A|A|2093
7MSM|1|A|C|2094
7MSM|1|A|C|2095
*
7MSM|1|A|G|2119
7MSM|1|A|A|2120
7MSM|1|A|G|2121
7MSM|1|A|A|2122
7MSM|1|A|A|2123
7MSM|1|A|U|2124

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L1

Chain x

Energy-dependent translational throttle protein EttA