IL_7MSM_106

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

UUGAG*CAAGAUCAG

Length

14 nucleotides

Bulged bases

7MSM|1|A|C|3018

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_106 not in the Motif Atlas

Homologous match to IL_4WF9_099

Geometric discrepancy: 0.091

The information below is about IL_4WF9_099

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.3

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

7MSM|1|A|U|2874
7MSM|1|A|U|2875
7MSM|1|A|G|2876
7MSM|1|A|A|2877
7MSM|1|A|G|2878
*
7MSM|1|A|C|3012
7MSM|1|A|A|3013
7MSM|1|A|A|3014
7MSM|1|A|G|3015
7MSM|1|A|A|3016
7MSM|1|A|U|3017
7MSM|1|A|C|3018
7MSM|1|A|A|3019
7MSM|1|A|G|3020

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13