IL_7MSM_109

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

UGCAC*GAUAG

Length

10 nucleotides

Bulged bases

7MSM|1|A|C|2927, 7MSM|1|A|A|2928

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_109 not in the Motif Atlas

Homologous match to IL_7RQB_105

Geometric discrepancy: 0.2261

The information below is about IL_7RQB_105

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_08296.3

Basepair signature

cWW-L-tHS-L-cWW

Number of instances in this motif group

4

Unit IDs

7MSM|1|A|U|2925
7MSM|1|A|G|2926
7MSM|1|A|C|2927
7MSM|1|A|A|2928
7MSM|1|A|C|2929
*
7MSM|1|A|G|2956
7MSM|1|A|A|2957
7MSM|1|A|U|2958
7MSM|1|A|A|2959
7MSM|1|A|G|2960

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19