IL_7MSM_114

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

UGGAAG*UGUAG

Length

11 nucleotides

Bulged bases

7MSM|1|A|U|3102

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_114 not in the Motif Atlas

Homologous match to IL_4WF9_108

Geometric discrepancy: 0.1807

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

7MSM|1|A|U|3082
7MSM|1|A|G|3083
7MSM|1|A|G|3084
7MSM|1|A|A|3085
7MSM|1|A|A|3086
7MSM|1|A|G|3087
*
7MSM|1|A|U|3100
7MSM|1|A|G|3101
7MSM|1|A|U|3102
7MSM|1|A|A|3103
7MSM|1|A|G|3104

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19