3D structure

PDB id
7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.79 Å

Loop

Sequence
UGCAU*AUG
Length
8 nucleotides
Bulged bases
7MSM|1|a|C|1045
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MSM_168 not in the Motif Atlas
Homologous match to IL_4LFB_044
Geometric discrepancy: 0.0873
The information below is about IL_4LFB_044
Detailed Annotation
Isolated cWS basepair
Broad Annotation
No text annotation
Motif group
IL_76319.5
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
3

Unit IDs

7MSM|1|a|U|1043
7MSM|1|a|G|1044
7MSM|1|a|C|1045
7MSM|1|a|A|1046
7MSM|1|a|U|1047
*
7MSM|1|a|A|1196
7MSM|1|a|U|1197
7MSM|1|a|G|1198

Current chains

Chain a
16S rRNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14 type Z

Coloring options:


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