IL_7MT3_169

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT3_169 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.0795

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7MT3|1|a|C|1295
7MT3|1|a|G|1296
7MT3|1|a|G|1297
7MT3|1|a|A|1298
7MT3|1|a|U|1299
7MT3|1|a|C|1300
*
7MT3|1|a|G|1321
7MT3|1|a|U|1322
7MT3|1|a|G|1323
7MT3|1|a|A|1324
7MT3|1|a|A|1325
7MT3|1|a|G|1326

Current chains

Chain a

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S13