IL_7N1P_058

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_058 not in the Motif Atlas

Homologous match to IL_4LFB_055

Geometric discrepancy: 0.0624

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7N1P|1|16|C|1303
7N1P|1|16|G|1304
7N1P|1|16|G|1305
7N1P|1|16|A|1306
7N1P|1|16|U|1307
7N1P|1|16|U|1308
*
7N1P|1|16|A|1329
7N1P|1|16|U|1330
7N1P|1|16|G|1331
7N1P|1|16|A|1332
7N1P|1|16|A|1333
7N1P|1|16|G|1334

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SM

30S ribosomal protein S13