IL_7N1P_101

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

7N1P|1|23|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_101 not in the Motif Atlas

Geometric match to IL_5J7L_280

Geometric discrepancy: 0.0575

The information below is about IL_5J7L_280

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7N1P|1|23|U|1018
7N1P|1|23|U|1019
7N1P|1|23|A|1020
7N1P|1|23|A|1021
7N1P|1|23|G|1022
7N1P|1|23|U|1023
7N1P|1|23|G|1024
*
7N1P|1|23|C|1140
7N1P|1|23|U|1141
7N1P|1|23|A|1142
7N1P|1|23|A|1143
7N1P|1|23|A|1144

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LF

50S ribosomal protein L6

Chain LM

50S ribosomal protein L13

Chain Lj

50S ribosomal protein L36