IL_7N1P_187

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

7N1P|1|23|U|846, 7N1P|1|23|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_187 not in the Motif Atlas

Geometric match to IL_8B0X_179

Geometric discrepancy: 0.133

The information below is about IL_8B0X_179

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

7N1P|1|23|A|844
7N1P|1|23|A|845
7N1P|1|23|U|846
7N1P|1|23|U|847
7N1P|1|23|C|848
*
7N1P|1|23|G|930
7N1P|1|23|U|931
7N1P|1|23|U|932
7N1P|1|23|A|933
7N1P|1|23|U|934

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Ld

50S ribosomal protein L30