IL_7N2C_056

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7N2C|1|16|C|1400, 7N2C|1|16|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_056 not in the Motif Atlas

Homologous match to IL_5J7L_058

Geometric discrepancy: 0.135

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7N2C|1|16|C|1399
7N2C|1|16|C|1400
7N2C|1|16|G|1401
*
7N2C|1|16|C|1501
7N2C|1|16|A|1502
7N2C|1|16|A|1503
7N2C|1|16|G|1504

Current chains

Chain 16

16S rRNA

Nearby chains

Chain Pt

Transfer RNA; tRNA

Chain mR

Chains: mR