IL_7N2C_082

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_082 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.0934

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7N2C|1|23|U|703
7N2C|1|23|G|704
7N2C|1|23|A|705
7N2C|1|23|A|706
7N2C|1|23|G|707
*
7N2C|1|23|U|724
7N2C|1|23|G|725
7N2C|1|23|G|726
7N2C|1|23|A|727
7N2C|1|23|G|728

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2