IL_7N2C_085

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

AAUU*AU

Length

6 nucleotides

Bulged bases

7N2C|1|23|U|846

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_085 not in the Motif Atlas

Homologous match to IL_5J7L_267

Geometric discrepancy: 0.1132

The information below is about IL_5J7L_267

Detailed Annotation

90 degree turn

Broad Annotation

90 degree turn

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

7N2C|1|23|A|844
7N2C|1|23|A|845
7N2C|1|23|U|846
7N2C|1|23|U|847
*
7N2C|1|23|A|933
7N2C|1|23|U|934

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Ld

50S ribosomal protein L30