IL_7N2C_129

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UGAGG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_129 not in the Motif Atlas

Homologous match to IL_5J7L_310

Geometric discrepancy: 0.1253

The information below is about IL_5J7L_310

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7N2C|1|23|U|1720
7N2C|1|23|G|1721
7N2C|1|23|A|1722
7N2C|1|23|G|1723
7N2C|1|23|G|1724
*
7N2C|1|23|U|1736
7N2C|1|23|G|1737
7N2C|1|23|G|1738
7N2C|1|23|A|1739
7N2C|1|23|G|1740

Current chains

Chain 23

23S rRNA

Nearby chains