IL_7N2C_163

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GAAC*G(PSU)(PSU)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_163 not in the Motif Atlas

Geometric match to IL_6AZ4_001

Geometric discrepancy: 0.356

The information below is about IL_6AZ4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69145.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7N2C|1|23|G|2588
7N2C|1|23|A|2589
7N2C|1|23|A|2590
7N2C|1|23|C|2591
*
7N2C|1|23|G|2603
7N2C|1|23|PSU|2604
7N2C|1|23|PSU|2605
7N2C|1|23|C|2606

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2

Chain Pt

Transfer RNA; tRNA