IL_7N30_134
3D structure
- PDB id
- 7N30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- UGCAAAC*GGACGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 7N30|1|23|A|1801, 7N30|1|23|C|1816, 7N30|1|23|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7N30_134 not in the Motif Atlas
- Homologous match to IL_5J7L_313
- Geometric discrepancy: 0.0493
- The information below is about IL_5J7L_313
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.5
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7N30|1|23|U|1798
7N30|1|23|G|1799
7N30|1|23|C|1800
7N30|1|23|A|1801
7N30|1|23|A|1802
7N30|1|23|A|1803
7N30|1|23|C|1804
*
7N30|1|23|G|1813
7N30|1|23|G|1814
7N30|1|23|A|1815
7N30|1|23|C|1816
7N30|1|23|G|1817
7N30|1|23|U|1818
7N30|1|23|A|1819
7N30|1|23|U|1820
7N30|1|23|A|1821
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain 16
- Small subunit ribosomal RNA; SSU rRNA
- Chain LB
- 50S ribosomal protein L2
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