IL_7N31_133

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

UGCAAAC*GGACGUAUA

Length

16 nucleotides

Bulged bases

7N31|1|23|A|1801, 7N31|1|23|C|1816, 7N31|1|23|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N31_133 not in the Motif Atlas

Homologous match to IL_5J7L_313

Geometric discrepancy: 0.0532

The information below is about IL_5J7L_313

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_17069.5

Basepair signature

cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW

Number of instances in this motif group

5

Unit IDs

7N31|1|23|U|1798
7N31|1|23|G|1799
7N31|1|23|C|1800
7N31|1|23|A|1801
7N31|1|23|A|1802
7N31|1|23|A|1803
7N31|1|23|C|1804
*
7N31|1|23|G|1813
7N31|1|23|G|1814
7N31|1|23|A|1815
7N31|1|23|C|1816
7N31|1|23|G|1817
7N31|1|23|U|1818
7N31|1|23|A|1819
7N31|1|23|U|1820
7N31|1|23|A|1821

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 16

Small subunit ribosomal RNA; SSU rRNA

Chain LB

50S ribosomal protein L2