IL_7N8B_052
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 7N8B|1|A1|U|1191, 7N8B|1|A1|C|1192, 7N8B|1|A1|C|1316, 7N8B|1|A1|A|1318
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7N8B_052 not in the Motif Atlas
- Geometric match to IL_5TBW_051
- Geometric discrepancy: 0.1172
- The information below is about IL_5TBW_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7N8B|1|A1|C|1187
7N8B|1|A1|U|1188
7N8B|1|A1|C|1189
7N8B|1|A1|A|1190
7N8B|1|A1|U|1191
7N8B|1|A1|C|1192
7N8B|1|A1|A|1193
7N8B|1|A1|G|1194
*
7N8B|1|A1|C|1314
7N8B|1|A1|U|1315
7N8B|1|A1|C|1316
7N8B|1|A1|A|1317
7N8B|1|A1|A|1318
7N8B|1|A1|G|1319
Current chains
- Chain A1
- 25S
Nearby chains
- Chain AH
- 60S ribosomal protein L9-A
- Chain AM
- 60S ribosomal protein L14-A
- Chain AO
- 60S ribosomal protein L16-A
- Chain AS
- 60S ribosomal protein L20-A
- Chain Am
- 60S ribosomal protein L40-A
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