IL_7N8B_195
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 7N8B|1|B5|G|876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7N8B_195 not in the Motif Atlas
- Geometric match to IL_4V88_431
- Geometric discrepancy: 0.0946
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7N8B|1|B5|C|874
7N8B|1|B5|G|875
7N8B|1|B5|G|876
7N8B|1|B5|G|877
7N8B|1|B5|G|878
*
7N8B|1|B5|C|950
7N8B|1|B5|A|951
7N8B|1|B5|A|952
7N8B|1|B5|G|953
Current chains
- Chain B5
- 18S RIBOSOMAL RNA
Nearby chains
- Chain Ac
- 60S ribosomal protein L30
- Chain BB
- 40S ribosomal protein S1-A
- Chain BN
- 40S ribosomal protein S13
- Chain Ba
- 40S ribosomal protein S26-B
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